Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905862.1_cds_XP_016456123.1_49990
CDS Infomation

[gene=LOC107780115] [db_xref=GeneID:107780115] [protein=probable pectinesterase/pectinesterase inhibitor 20] [protein_id=XP_016456123.1] [location=join(28055..28592,29156..29515,30382..31085)] [gbkey=CDS]
Sequence

ATGTTTCAGATAAGTATTATTCATACCCAATGTTTAATTGCCATGGCATTCACACATTCC
ATCCTTGTATTCTTCATACTTCAATTCTTCTTCTCTCCTTCTCATGCATCTCTCTCTTCT
GATGAAATTTGCAGCAACACCCCTTTTCCTAACTTGTGCAAAACTTTACTCCCTCCCAAC
AATTCTATTGACATTTATGACTCAGGAAGGCTCTCCATCCAGCTTTCCCTTTCAACAACT
AGTCAGATTCTTAACTCAATCAACGGTTTCCTCAATCCAATTGATCTATTACTCCCTAAA
AGCACCAGTTCTGCTCTCCAAGATTGCCAGTTCCTCCTTGGCCTAAACGTTGATTTATTA
TCTACTGCTGCTGCTGTTACTAAGAAACCAAAAGATTCCCTTGAGAATACAGAAGCAGAT
GATGTATTAACCTGGCTTAGTGCAACTATAACCAATAAACAAACTTGTTTGGATGGTCTT
CTAGTTGCGCCTTCTATTTTACAGGTTTCTAAGTTGATTACACCCATAATTTCTAAAGGA
AGCATGACGTGTAGTGTGTCACTCGCGCTCTTTAAGAATGGGTGGAATCCTGATTCTGTT
TTAGGGAAGGTAATTAGTTGGAGTATGTTGAAAATTAGCCAAAAGGTGGTAGTGAATCCT
GATGGAAGTGGGGATTATACTACTATCAATGATGCAATCGCAGCTGCCCCGAACAATACC
CCAGCAAATGAAGGCTATTACCAGATATATGTGGTTGCTGGTGTCTACCTTGAGTATATT
TCAATTGCTAAAAACAAGAACTATTTGATGATGGTTGGTGATGGCATAAACAAGACTATA
GTCACCGGGAATAGAAATGTACCTGATGGATGGACAACTTTCAATTCTGCAACTTTTGCT
GTAGACGGGCAAGGATTTGTGGCAGTAAACATTACATTTAAAAACACAGCAGGAGCAGCA
AAGTTCCAAGCAGTAGCCGTTAGGAATAGTGCTGATCTATCCGCATTCTACCACTGCAGC
TTTGAAGGGTATCAAGACACTCTGTACACACATTCCCTGAGACAGTTCTACAAGAACTGT
GATATCTATGGGACAATAGATTTCATATTCGGAAATGCAGCAGTTGTTTTCCAAAACTGT
AACATATATCCACGCCTTCCATTGCGCGGCCAATTTAATGCAATTACAGCACAGGGCAGA
TCAGACATTAACCAGAACACAGGCATATCCATTCACAAATGTACCATCACACCCGCTTCT
GACTTAGCCTCGTACAATGGCACTACTCCAGTACGGACATATTTAGGCAGGCCATGGAAA
GAGTACTCGCGAACTGTTTATATGCAATCATTTTTGGACAGTTTTATTCATCCTGATGGT
TGGTCGATTTGGACAGGAGATTTTGCGTTAAGTACATTGTGTTATGCTGAATATAAGAAC
ATGGGTCCAGGATCGGATACTAGTAATAGGGTTACATGGCCTGGTTATCGTAGTGAGATT
AACTTCTTGGATGCATCTTATTTCACTGTCTCCAATTTCATAGTGGGGAATTATTGGCTG
CCTTGGACTGGAGTCCCTTACACTGGTGGTTTATATTTTTAA

Peptide Sequence

PEP ID

XP_016456123.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 20 [Nicotiana tabacum]
Sequence

MFQISIIHTQCLIAMAFTHSILVFFILQFFFSPSHASLSSDEICSNTPFPNLCKTLLPPN
NSIDIYDSGRLSIQLSLSTTSQILNSINGFLNPIDLLLPKSTSSALQDCQFLLGLNVDLL
STAAAVTKKPKDSLENTEADDVLTWLSATITNKQTCLDGLLVAPSILQVSKLITPIISKG
SMTCSVSLALFKNGWNPDSVLGKVISWSMLKISQKVVVNPDGSGDYTTINDAIAAAPNNT
PANEGYYQIYVVAGVYLEYISIAKNKNYLMMVGDGINKTIVTGNRNVPDGWTTFNSATFA
VDGQGFVAVNITFKNTAGAAKFQAVAVRNSADLSAFYHCSFEGYQDTLYTHSLRQFYKNC
DIYGTIDFIFGNAAVVFQNCNIYPRLPLRGQFNAITAQGRSDINQNTGISIHKCTITPAS
DLASYNGTTPVRTYLGRPWKEYSRTVYMQSFLDSFIHPDGWSIWTGDFALSTLCYAEYKN
MGPGSDTSNRVTWPGYRSEINFLDASYFTVSNFIVGNYWLPWTGVPYTGGLYF

Transcript Sequence

Gene sequence data has not been registered.